seriation (1.2-8)

1 user

Infrastructure for Ordering Objects Using Seriation.

Infrastructure for ordering objects with an implementation of several seriation/sequencing/ordination techniques to reorder matrices, dissimilarity matrices, and dendrograms. Also provides (optimally) reordered heatmaps, color images and clustering visualizations like dissimilarity plots, and visual assessment of cluster tendency plots (VAT and iVAT).

Maintainer: Michael Hahsler
Author(s): Michael Hahsler [aut, cre, cph], Christian Buchta [aut, cph], Kurt Hornik [aut, cph], Fionn Murtagh [ctb, cph], Michael Brusco [ctb, cph], Stephanie Stahl [ctb, cph], Hans-Friedrich Koehn [ctb, cph]

License: GPL-3

Uses: cluster, colorspace, dendextend, gclus, gplots, MASS, qap, registry, TSP, biclust, testthat, GA, DendSer
Reverse depends: arulesViz, ChemoSpec, ClusteredMutations, corrgram, DendSer, matie, mpMap
Reverse suggests: ChemoSpec, corrplot, dendextend, dendsort, disclapmix, flexclust, ggraph, ockc, SFS, tidygraph
Reverse enhances: relations

Released 5 months ago.

28 previous versions



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Related packages: amap, bayesm, biclust, cba, clue, cluster, clusterGeneration, clusterSim, clustvarsel, clv, e1071, fpc, hybridHclust, mclust, poLCA, trimcluster, ash, ade4, aplpack, gclus(20 best matches, based on common tags.)

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Visit seriation on R Graphical Manual.