specmine (2.0.2)

Metabolomics and Spectral Data Analysis and Mining.


Provides a set of methods for metabolomics data analysis, including data loading in different formats, pre-processing, metabolite identification, univariate and multivariate data analysis, machine learning, feature selection and pathway analysis. Case studies can be found on the website: . 'rcytoscapejs' is not present in a mainstream repository, but it can be obtained by typing 'devtools::install_github('cytoscape/r-cytoscape.js')' on the R command line. It will be downloaded when installed, if not present.

Maintainer: Miguel Rocha
Author(s): Christopher Costa <chrisbcl@hotmail.com> [aut], Marcelo Maraschin <mtocsy@gmail.com> [aut], Miguel Rocha <mrocha@di.uminho.pt> [aut, cre], Sara Cardoso <saracardoso501@gmail.com> [aut], Telma Afonso <telma.afonso94@gmail.com [aut]>, C. Beleites [ctb], Jie Hao [ctb], Daniel Jacob [ctb]

License: GPL (>= 2)

Uses: baseline, caret, compare, devtools, ellipse, gdata, GGally, ggdendro, ggplot2, hyperSpec, igraph, impute, MASS, Metrics, pcaPP, pls, qdap, RColorBrewer, readJDX, reticulate, rgl, scatterplot3d, speaq

Released almost 2 years ago.