sybilcycleFreeFlux (2.0.1)

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Cycle-Free Flux Balance Analysis (CycleFreeFlux).

http://cran.r-project.org/web/packages/sybilcycleFreeFlux

Implement cycle-Free flux balance analysis (CycleFreeFlux), cycle-free flux variability, and Random Sampling of solution space. Desouki, A. A., Jarre, F., Gelius-Dietrich, G., & Lercher, M. J. (2015). CycleFreeFlux: efficient removal of thermodynamically infeasible loops from flux distributions. Bioinformatics, 31(13), 2159-2165. . Flux balance analysis is a technique to find fluxes in metabolic models at steady state. It is described in Orth, J.D., Thiele, I. and Palsson, B.O. What is flux balance analysis? Nat. Biotech. 28, 245-248 (2010).

Maintainer: Abdelmoneim Amer Desouki
Author(s): Abdelmoneim Amer Desouki [aut, cre]

License: GPL-3

Uses: MASS, Matrix, sybil, glpkAPI, cplexAPI

Released 3 months ago.


2 previous versions

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