tigger (0.3.0)

Infers Novel Immunoglobulin Alleles from Sequencing Data.

http://tigger.readthedocs.io
http://cran.r-project.org/web/packages/tigger

Infers the V genotype of an individual from immunoglobulin (Ig) repertoire sequencing data (AIRR-Seq, Rep-Seq). Includes detection of any novel alleles. This information is then used to correct existing V allele calls from among the sample sequences. Citations: Gadala-Maria, et al (2015) .

Maintainer: Jason Vander Heiden
Author(s): Daniel Gadala-Maria [aut], Susanna Marquez [aut], Moriah Cohen [aut], Gur Yaari [aut], Jason Vander Heiden [ctb, cre], Steven Kleinstein [aut, cph]

License: CC BY-SA 4.0

Uses: alakazam, doParallel, dplyr, foreach, ggplot2, gridExtra, gtools, iterators, lazyeval, rlang, shazam, stringi, tidyr, testthat, knitr

Released 12 months ago.