vhica (0.2.4)

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Vertical and Horizontal Inheritance Consistence Analysis.


The "Vertical and Horizontal Inheritance Consistence Analysis" method is described in the following publication: "VHICA: a new method to discriminate between vertical and horizontal transposon transfer: application to the mariner family within Drosophila" by G. Wallau. et al. (2016) . The purpose of the method is to detect horizontal transfers of transposable elements, by contrasting the divergence of transposable element sequences with that of regular genes.

Maintainer: Arnaud Le Rouzic
Author(s): Arnaud Le Rouzic

License: GPL-2

Uses: gtools, plotrix, seqinr, ape

Released over 3 years ago.



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